バイオ研究とバイオ研究者の情報チャンネル
                   biolohas.jp

 

protein AND (interaction OR binding)
20091224

1019446

HERC2 coordinates ubiquitin-dependent assembly of DNA repair factors on damaged chromosomes.
Bekker-Jensen S, Danielsen JR, Fugger K, Gromova I, Nerstedt A, Bartek J, Lukas J, Mailand N.
Nat Cell Biol. 2010 Jan;12(1):80-6. Epub 2009 Dec 20.PMID: 20023648
ユビキチン化とタンパク質間相互作用


Target identification using drug affinity responsive target stability (DARTS).
Lomenick B, Hao R, Jonai N, Chin RM, Aghajan M, Warburton S, Wang J, Wu RP, Gomez F, Loo JA, Wohlschlegel JA, Vondriska TM, Pelletier J, Herschman HR, Clardy J, Clarke CF, Huang J.
Proc Natl Acad Sci U S A. 2009 Dec 7. [Epub ahead of print]PMID: 19995983

NOTCH AND THE SKELETON.
Zanotti S, Canalis E.
Mol Cell Biol. 2009 Dec 7. [Epub ahead of print]PMID: 19995916


Rational design of a structural and functional nitric oxide reductase.
Yeung N, Lin YW, Gao YG, Zhao X, Russell BS, Lei L, Miner KD, Robinson H, Lu Y.
Nature. 2009 Nov 25. [Epub ahead of print]PMID: 19940850
酵素をデザインする


HIV-1 Gag-specific immunity induced by a lentivector-based vaccine directed to dendritic cells.
Dai B, Yang L, Yang H, Hu B, Baltimore D, Wang P.
Proc Natl Acad Sci U S A. 2009 Nov 16.
PMID: 19918062
レンチウィルスベクターのワクチン

RNA recognition by the embryonic cell fate determinant and germline totipotency factor MEX-3.
Pagano JM, Farley BM, Essien KI, Ryder SP.
Proc Natl Acad Sci U S A. 2009 Nov 13.
PMID: 19915141
MEX-3が作用するRNAのコンセンサス配列


A type I-secreted, sulfated peptide triggers XA21-mediated innate immunity.
Lee SW, Han SW, Sririyanum M, Park CJ, Seo YS, Ronald PC.
Science. 2009 Nov 6;326(5954):850-3.
PMID: 19892983

バクテリアから獲得した、コメの免疫促進ペプチド

Mitotic chromosome interactions of Epstein-Barr nuclear antigen 1 (EBNA1) and human EBNA1-binding protein 2 (EBP2).
Kapur Nayyar V, Shire K, Frappier L.
J Cell Sci. 2009 Nov 3.
PMID: 19887584
体細胞分裂の際のタンパク質間相互作用


Evolution of biomolecular networks - lessons from metabolic and protein interactions
.
Yamada T, Bork P.
Nat Rev Mol Cell Biol. 2009 Nov;10(11):791-803.PMID: 19851337
レビュー

Dynamics and molecular interactions of linker of nucleoskeleton and cytoskeleton (LINC) complex proteins.
Ostlund C, Folker ES, Choi JC, Gomes ER, Gundersen GG, Worman HJ.
J Cell Sci. 2009 Oct 20. [Epub ahead of print]PMID: 19843581
核内骨格、細胞内骨格

Computer-aided design of functional protein interactions.
Mandell DJ, Kortemme T.
Nat Chem Biol. 2009 Nov;5(11):797-807.PMID: 19841629
コンピューターで相互作用を予測



Histone H1 binding is inhibited by histone variant H3.3.
Braunschweig U, Hogan GJ, Pagie L, van Steensel B.
EMBO J. 2009 Oct 15.
PMID: 19834459
ヒストンH1とH3.3が競合している

Human DNA methylomes at base resolution show widespread epigenomic differences.
Lister R, Pelizzola M, Dowen RH, Hawkins RD, Hon G, Tonti-Filippini J, Nery JR, Lee L, Ye Z, Ngo QM, Edsall L, Antosiewicz-Bourget J, Stewart R, Ruotti V, Millar AH, Thomson JA, Ren B, Ecker JR.
Nature. 2009 Oct 14. [Epub ahead of print]
PMID: 19829295
一塩基単位で、ゲノム中のシトシンのメチル化を解析


Separation and detection of large phosphoproteins using Phos-tag SDS-PAGE.
Kinoshita E, Kinoshita-Kikuta E, Koike T.
Nat Protoc. 2009;4(10):1513-21. Epub 2009 Sep 24.
PMID: 19798084
リン酸化たんぱく質の分離と同定

Cooperative binding of two acetylation marks on a histone tail by a single bromodomain.
Moriniere J, Rousseaux S, Steuerwald U, Soler-Lopez M, Curtet S, Vitte AL, Govin J, Gaucher J, Sadoul K, Hart DJ, Krijgsveld J, Khochbin S, Muller CW, Petosa C.
Nature. 2009 Oct 1;461(7264):664-8.
PMID: 19794495
ヒストンの修飾と転写開始


Histone crosstalk between H3S10ph and H4K16ac generates a histone code that mediates transcription elongation.
Zippo A, Serafini R, Rocchigiani M, Pennacchini S, Krepelova A, Oliviero S.
Cell. 2009 Sep 18;138(6):1122-36.
PMID: 19766566
ヒストンと転写との相互作用

A Genome-wide RNAi Screen for Modifiers of the Circadian Clock in Human Cells.
Zhang EE, Liu AC, Hirota T, Miraglia LJ, Welch G, Pongsawakul PY, Liu X, Atwood A, Huss JW 3rd, Janes J, Su AI, Hogenesch JB, Kay SA.
Cell. 2009 Sep 16.
PMID: 19765810
サーカディアンリズムを変える遺伝子をRNAiでスクリーニングし、相互作用を推定

Proteomics strategy for quantitative protein interaction profiling in cell extracts.
Sharma K, Weber C, Bairlein M, Greff Z, Keri G, Cox J, Olsen JV, Daub H.
Nat Methods. 2009 Sep 13.
PMID: 19749761
プロトコール


In vivo expression and purification of aptamer-tagged small RNA regulators.
Said N, Rieder R, Hurwitz R, Deckert J, Urlaub H, Vogel J.
Nucleic Acids Res. 2009 Sep 2
PMID: 19726584
スモールRNA結合タンパク質群を精製

Making the right connections: biological networks in the light of evolution.
Knight CG, Pinney JW.
Bioessays. 2009 Aug 31.
PMID: 19722181
タンパク質間相互作用の進化


MCM10 mediates RECQ4 association with MCM2-7 helicase complex during DNA replication.
Xu X, Rochette PJ, Feyissa EA, Su TV, Liu Y.
EMBO J. 2009 Aug 20.
PMID: 19696745
複製に関与するタンパク質複合体

Direct observation of the binding state of the kinesin head to the microtubule.
Guydosh NR, Block SM.
Nature. 2009 Aug 19.
PMID: 19693012
キネシン一分子の動きを観察


A small molecule blocking oncogenic protein EWS-FLI1 interaction with RNA helicase A inhibits growth of Ewing's sarcoma.
Erkizan HV, Kong Y, Merchant M, Schlottmann S, Barber-Rotenberg JS, Yuan L, Abaan OD, Chou TH, Dakshanamurthy S, Brown ML, Uren A, Toretsky JA.
Nat Med. 2009 Jul;15(7):750-6. Epub 2009 Jul 5.
PMID: 19584866
タンパク質複合体と低分子との結合

Ubiquitin degradation with its substrate provides clues to proteasome regulation.
Shabek N, Herman-Bachinsky Y, Ciechanover A.
Proc Natl Acad Sci U S A. 2009 Jul 6.
PMID: 19581590
ユビキチンとプロテアゾームによるタンパク質分解

Conditional and reversible disruption of essential herpesvirus proteins.
Glas M, Busche A, Wagner K, Messerle M, Borst EM.
Nat Methods. 2009 Jul 5.
PMID: 19578384
ヘルペスウィルスのたんぱく質を不安定化させる

Reversible acetylation of the chromatin remodelling complex NoRC is required for non-coding RNA-dependent silencing.
Zhou Y, Schmitz KM, Mayer C, Yuan X, Akhtar A, Grummt I.
Nat Cell Biol. 2009 Jul 5.
PMID: 19578370
クロモゾームタンパク質のアセチル化とncRNA